Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

General information

URL: http://planttfdb.gao-lab.org/
Full name: Plant Transcription Factor Database
Description: PlantTFDB provides genomic TF repertoires across Viridiplantae. Based on the family assignment rules, we identified 320,370 transcription factors from 165 species and classified them into 58 families. Species included in PlantTFDB 4.0 covers the main lineages of green plants, providing genomic TF repertoires across green plants.
Year founded: 2008
Last update: 2019-10
Version: v5.0
Accessibility:
Manual:
Accessible
Country/Region: China

Contact information

University/Institution: Peking University
Address: 1 State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Center for Bioinformatics, Peking University, Beijing 100871, People’s Republic of China. 2 Beijing Advanced Innovation Center for Genomics (ICG), Biomedical Pioneering Innovation Center (BIOPIC), Peking University, Beijing 100871, People’s Republic of China.
City: Beijing
Province/State: Beijing
Country/Region: China
Contact name (PI/Team): Ge Gao
Contact email (PI/Helpdesk): gaog@mail.cbi.pku.edu.cn

Publications

Ranking

All databases:
120/6271 (98.102%)
Gene genome and annotation:
48/1781 (97.361%)
Interaction:
18/1052 (98.384%)
120
Total Rank
1,702
Citations
106.375
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Record metadata

Created on: 2015-06-20
Curated by:
Lina Ma [2022-06-09]
Lina Ma [2021-09-03]
Dong Zou [2020-10-14]
[2018-12-01]
[2018-11-29]
Lina Ma [2018-05-10]
Shixiang Sun [2017-02-20]
Shixiang Sun [2016-03-25]
Shixiang Sun [2015-11-21]
Shixiang Sun [2015-06-26]