Plant
Editosome
Database
Summary
| Editing Factor: | PPR6 |
| Synonym: | OsPPR6 |
| Description: | In the osppr6 mutants, mRNA levels of plastidic genes transcribed by the plastid-encoded RNA polymerase decreased, while those of genes transcribed by the nuclear-encoded RNA polymerase increased; We further investigated plastidic RNA editing and splicing in the osppr6 mutants and found that the ndhB transcript was mis-edited and the ycf3 transcript was mis-spliced; Therefore, we demonstrate that OsPPR6, a PPR protein, regulates early chloroplast biogenesis and participates in editing of ndhB and splicing of ycf3 transcripts in rice |
| Protein Family: | Pentatricopeptide repeat (PPR) protein |
| Subclass: | DYW |
| Physical Interaction: | NA |
| Construct Structure: | PLS-E1-E2-DYW |
| Gene ID & Species: | LOC_OS05G49920 (Oryza sativa) |
| Edited Gene(s): | ndhB |
| Editing Type(s): | C-to-U (3) |
| Publication(s): |
[1] OsPPR6, a pentatricopeptide repeat protein involved in editing and splicing chloroplast RNA, is required for chloroplast biogenesis in rice, Plant Molecular Biology, 2017. [doi:10.1007/s11103-017-0654-0] |
Editing Details
| Species | Gene ID | Organelle | Edited Gene | Position | Region | Nuclear Genome | Organelle Genome | Other Region | Other Position | Editing Type | Codon | Amino Acid | Molecular Effect | Experiment Details | ||||||||||||||||||||||||||||||||||||||||||||||||||
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| Oryza sativa | LOC_OS05G49920 | Chloroplast | ndhB | 737 | CDS | Rice Genome Annotation Project (http://rice.uga.edu) | NA | NA | NA | C-to-U | CCA=>CUA | P=>L | Recoding |
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Last update: Sep 2026
(version 2.0)