Plant Editosome Database
a curated database of RNA editosome in plants

PpPPR_91 - Plant Editosome Database - BIG Data Center
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Summary

Editing Factor: PpPPR_91
Synonym: Phypa_211228
Description: Encoding a PPR-DYW protein involved in RNA editing.
Protein Family: PPR
Subclass: DYW
Construct Structure: PLS-E/E+-DYW
Gene ID & Species: PP1S68_207V6 (Physcomitrium patens)
Edited Gene(s): nad5
Editing Type(s): C-to-U (3)
Publication(s): [1] Targeted gene disruption identifies three PPR-DYW proteins involved in RNA editing for five editing sites of the moss mitochondrial transcripts., Plant & cell physiology, 2010. [PMID=20837503]

Editing Details

Species Gene ID Organelle Edited Gene Position Region Editing Type Codon Amino Acid Molecular Effect Experiment Details
Physcomitrium patens PP1S68_207V6 Mitochondrion nad5 730 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NA△91-1The Nptii Gene CassetteRestriction sites - BamhiKnockoutSevere growth retardationProtonema3 daysDirect Sequencing of PCR Products0.00%UneditedAbsent20837503
NA△91-13The Nptii Gene CassetteRestriction sites - BamhiKnockoutSevere growth retardationProtonema3 daysDirect Sequencing of PCR Products0.00%UneditedAbsent20837503
NAWTControlControlControlNormalProtonema3 daysDirect Sequencing of PCR Products100.00%CompleteNone20837503
Last update: Jul 2021 (version 1.0)