NGSPipe Next generation sequencing pipeline
Introduction
Pipeline for next generation sequencing analysis.
- raw read quality control
- read alignment
- mutation detection
Publications
No Publication Information
Credits
- PENG JIA pengjia@stu.xjtu.edu.cn Investigator
Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, China
Community Ratings
Usability | Efficiency | Reliability | Rated By |
---|---|---|---|
2 users | |||
Sign in to rate | |||
pen***a@stu.xjtu.edu.cn (May 31, 2021) | |||
w_a***d@163.com (June 26, 2023) |
Summary
Accession | BT007161 |
---|---|
Tool Type | Pipeline & Protocol |
Category | Read alignment, SNP detection, CNV detection, Structural variant detection |
Platforms | Linux/Unix |
Technologies | BASH |
User Interface | Terminal Command Line |
Input Data | BAM, FASTA, FASTQ |
Latest Release | 0.1.0 (May 31, 2021) |
Download Count | 2416 |
Country/Region | China |
Submitted By | PENG JIA |
Fundings
2018YFC0910400