Mining gene (copA-like) This procedure was developed to mine the natural diversity of novel CopA proteins from eDNA. It also can be applied for mining other proteins.
Introduction
Mining gene (copA-like)
We developed a sequence-based functional metagenomics procedure for mining the diversity of copper resistance gene copA in global microbiomes, by combining the metagenomic assembly technology.
Publications
Sequence-based Functional Metagenomics Reveals Novel Natural Diversity of Functioning CopA in Environmental Microbiomes
Cited by NA (Google Schoolar as of May 17, 2022)
Credits
- Xiaofang Li xfli@sjziam.ac.cn Investigator
Carr, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, China
- Wenjun Li liwenjun181@mails.ucas.ac.cn Investigator
Carr, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, China
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Summary
Accession | BT007306 |
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Tool Type | Pipeline & Protocol |
Category | Gene prediction |
Platforms | Linux/Unix, Windows |
Technologies | BASH |
User Interface | Terminal Command Line |
Input Data | FASTA |
Latest Release | 1.0 (May 16, 2022) |
Download Count | 848 |
Country/Region | China |
Submitted By | Xiaofang Li |
Fundings
National Natural Science Foundation of China (No. 41877414), the National Key R&D Program of China (No.2018YFD0800306)