AnnoSmk An automated genome annotation pipeline

Introduction

AnnoSmk, an easy, comprehensive, and automated pipeline to generate gene annotations, combining the analytical capabilities of repeat masking, transcriptome alignment, and prediction of genome structure, available at https://github.com/yanhui-k/AnnoSmk.

the pipeline of AnnoSmk

Publications

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Credits

  1. Hui Yan 781039065@qq.com
    Investigator

    The Germplasm Bank of Wild Species in Southwest China, Kunming Institute of Botany, Chinese Academy of Sciences, China

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Summary
AccessionBT007455
Tool TypePipeline & Protocol
CategoryAnnotation pipeline
PlatformsLinux/Unix
TechnologiesBASH, Python3
User InterfaceTerminal Command Line
Input DataFASTA, FASTQ
Latest Release1.0 (April 13, 2024)
Download Count497
Country/RegionChina
Submitted ByHui Yan