Cardiovascular Disease Atlas
Data release 1.0
| Symbol | CVD Atlas ID | Species | Gene ID | Biotype | Chr | Start | End |
|---|---|---|---|---|---|---|---|
| ENSG00000289504 | CVDG024725 | Homo sapiens | ENSG00000289504 | lncRNA | 3 | 50651279 | 50653813 |
| Disease or trait | Score |
|---|---|
| Hypertension | 0.40938 |
| Ischemic stroke | 0.40938 |
| Myocardial infarction | 0.40938 |
| GO ID | GO term | Category |
|---|
| Tissue/cell type | Disease | Condition 1 | Condition 2 | Alteration | log2FC | P value | Adjusted P value | Method | PMID |
|---|---|---|---|---|---|---|---|---|---|
| No data available in table | |||||||||
| Dataset | Tissue/cell type | Reported disease | Mapped disease | log2FC | P value | Adjusted P value | Method | GEO accession |
|---|---|---|---|---|---|---|---|---|
| CVDS000015 | Blood | Ischemic stroke | Ischemic stroke | 1.15 | 5.69e-11 | 1.29e-9 | RNA-seq | GSE122709 |
| CVDS000019 | Blood | Ischemic stroke | Ischemic stroke | -1.44 | 3.54e-6 | 1.57e-5 | RNA-seq | GSE140275 |
| CVDS000025 | Aorta | Aortic dissection | Aortic dissection | -1.08 | 2.06e-3 | 2.30e-2 | RNA-seq | GSE147026 |
| CVDS000026 | Aorta | Aortic dissection | Aortic dissection | -1.26 | 2.51e-19 | 5.87e-17 | RNA-seq | GSE153434 |
| CVDS000028 | Arterial blood vessel | Intracranial aneurysm | Intracranial aneurysm | -2.02 | 8.05e-5 | 3.71e-3 | RNA-seq | GSE158558 |
| CVDS000531 | Macrophage | Atherosclerosis | Atherosclerosis | -16.3 | 5.45e-7 | 3.11e-5 | Microarray | GSE9874 |
| CVDS000548 | Heart right ventricle | Dilated cardiomyopathy | Dilated cardiomyopathy | 31.0 | 3.27e-3 | 4.78e-2 | Microarray | GSE29819 |
| CVDS000549 | Heart left ventricle | Arrhythmogenic right ventricular cardiomyopathy | Arrhythmogenic right ventricular cardiomyopathy | 34.2 | 1.69e-5 | 5.17e-3 | Microarray | GSE29819 |
| CVDS000625 | Plasma | Myocardial Infarction | Myocardial infarction | -1.03 | 1.20e-4 | 1.91e-2 | RNA-seq | GSE194388 |
| Reported disease | Mapped disease | RNADisease score | PMID | Gene link |
|---|---|---|---|---|
| Atherosclerosis | Atherosclerosis | 0.635617 | 32915179 | RNADisease |
| Reported disease/trait | Mapped trait | Tissue | Effect size | P value | Method | Publication | PMID | Gene link |
|---|---|---|---|---|---|---|---|---|
| No data available in table | ||||||||
| Reported disease | Mapped disease | Category | Description | Publication |
|---|---|---|---|---|
| No data available in table | ||||
| Reported disease | Mapped disease | Species | Description | Publication |
|---|---|---|---|---|
| No data available in table | ||||
| Variant | Reported disease/trait | Mapped disease/trait | Beta | Standard error | P value | Odds ratio | Ancestry | Dataset | Link |
|---|
| Reported disease/trait | Mapped disease/trait | Tissue | Best coloc SNP | GWAS risk SNP | SNP.PP.H4 | PP.H4.abf | Ancestry | Dataset |
|---|
| Variant | Reported disease | Mapped disease | Description | PMID |
|---|---|---|---|---|
| No data available in table | ||||
| Variant | Disease | Pre miRNA | Region | Mature miRNA | △G | Exp | PMID |
|---|---|---|---|---|---|---|---|
| No data available in table | |||||||
| Reported disease | Gene | Category | Description | Publication |
|---|---|---|---|---|
| No data available in table | ||||
| SNP | Reported disease | Mapped disease | Description | PMID |
|---|---|---|---|---|
| No data available in table | ||||
| Name | Delta beta | P value | Adjusted P value | Reported disease | Mapped disease | Dataset |
|---|
| Name | Relation to gene | Delta beta | P value | Adjusted P value | Tissue | Reported disease | Mapped disease | Condition 1 | Condition 2 | PMID |
|---|
| Reported disease | Mapped disease | Category | Description | Publication |
|---|---|---|---|---|
| No data available in table | ||||
| Reported disease | Mapped disease | Species | Description | Publication |
|---|---|---|---|---|
| No data available in table | ||||
| UniProt ID | Reported disease | Mapped disease | Average log2FC | P value | Dataset |
|---|
| Gene | PharmGKB gene ID | Chemical | PharmGKB chemical ID | Evidence | Association |
PK/PD
|
PMID |
|---|
| Chemical name | Chemical ID | Reported disease | Mapped disease | Inference score | #PMIDs | Gene link |
|---|