LOCUS C_AAB29166 1270 aa linear VRL 11-MAY-2023 DEFINITION surface glycoprotein [Severe acute respiratory syndrome coronavirus 2]. ACCESSION C_AAB29166 VERSION C_AAB29166.1 KEYWORDS . SOURCE Severe acute respiratory syndrome coronavirus 2 ORGANISM Severe acute respiratory syndrome coronavirus 2 Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus. DBSOURCE accession C_AA014191.1 REFERENCE 1 (residues 1 to 1270) AUTHORS Zhang,W. TITLE Direct Submission JOURNAL Submitted (11-MAY-2023) Microbe lab, Shanghai Municipal Center for Disease Control & Prevention, west zhongshan road 1380, Shanghai 200336, China COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Consensus sequence method v. 940-000133-00 Sequencing Technology :: MGISEQ-200 ##Genome-Assembly-Data-END## Method: conceptual translation. FEATURES Location/Qualifiers source 1..1270 /organism="Severe acute respiratory syndrome coronavirus 2" /isolate="SARS-CoV-2/human/CHN/SH-HG20230504-503/2023" /isolation_source="Pharyngeal swab" /host="Homo sapiens; Host_age: 35; Host_sex: Female" /country="China:Shanghai" /collection_date="2023-05-02" /note="Passage_details/history: Original; Additional_host_information: Patient infected while traveling in Singapore" Protein 1..1270 /product="surface glycoprotein" CDS 1..1270 /gene="S" /coded_by="C_AA014191.1:21530..25342" ORIGIN 1 mfvflvllpl vssqcvnlit rtqsytnsft rgvyypdkvf rssvlhstqd lflpffsnvt 61 wfhaihvsgt ngtkrfdnpv lpfndgvyfa steksniirg wifgttldsk tqsllivnna 121 tnvvikvcef qfcndpfldv yyhennksrm eselrvyssa nnctfeyvsq pflmdlegkq 181 gnfenlrefv fknidgyfki yskhtpvnlg rdlpqgfsal eplvdlpigi nitrfqtlla 241 lhrsyltpgd sssswtagaa ayyvgylqpr tfllkyneng titdavdcal dplsetkctl 301 ksftvekgiy qtsnfrvqpt esivrfpnit nlcpfhevfn attfasvyaw nrtrisncva 361 dysvlynfap ffafkcygvs ptklndlcft nvyadsfvir gnevsqiapg qtgniadyny 421 klpddftgcv iawnsnklds kvsgnynyly rlfrksklkp ferdisteiy qagnkpcngv 481 agfncysplq sygfrptygv ghqpyrvvvl sfellhapat vcgpkkstnl vknkcvnfnf 541 ngltgtgvlt esnkkflpfq qfgrdiadtt davrdpqtle ilditpcsfg gvsvitpgtn 601 tsnqvavlyq gvnctevpva ihadqltptw rvystgsnvf qtragcliga eyvnnsyecd 661 ipigagicas yqtqtkshrr arsvasqsii aytmslgaen svaysnnsia iptnftisvt 721 teilpvsmtk tsvdctmyic gdstecsnll lqygsfctql kraltgiave qdkntqevfa 781 qvkqiyktpp ikyfggfnfs qilpdpskps krsfiedllf nkvtladagf ikqygdclgd 841 iaardlicaq kfngltvlpp lltdemiaqy tsallagtit sgwtfgagaa lqipfamqma 901 yrfngigvtq nvlyenqkli anqfnsaigk iqdslsstas algklqdvvn hnaqalntlv 961 kqlsskfgai ssvlndilsr ldkveaevqi drlitgrlqs lqtyvtqqli raaeirasan 1021 laatkmsecv lgqskrvdfc gkgyhlmsfp qsaphgvvfl hvtyvpaqek nfttapaich 1081 dgkahfpreg vfvsngthwf vtqrnfyepq iittdntfvs gncdvvigiv nntvydplqp 1141 eldsfkeeld kyfknhtspd vdlgdisgin asvvniqkei drlnevaknl neslidlqel 1201 gkyeqyikwp wyiwlgfiag liaivmvtim lccmtsccsc lkgccscgsc ckfdeddsep 1261 vlkgvklhyt //