- Scientific Name
- Anser cygnoides
- Common Names
- Chinese goose, white Chinese goose; Swan goose; Anas cygnoid
- Bioproject
- PRJCA004305
- Biosample
- SAMC311132
- Accession No.
- GWHBAAW00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 16,161,428 (SNP), 2,500,320 (Indel)
- Submitter Organization
- college of Life Sciences, Jiangxi Science and Technology Normal University
- Contact
- Xueming Yan, xuemingyan@hotmail.com
- Sequence author(s)
- Xueming Yan
- Released Date
- 2022-12-01
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- wtdbg2 2019-01-26
- Sequencing & coverage
- PacBio 101.33
10X genomics 99.1
Illumina NovaSeq 6000 111.59
Bionano 137.47
Hi-C 112.91 - Download
-
DNA
- Publication(s)
- Jing Ouyang, et al. Chromosome-level genome and population genomics reveal evolutionary characteristics and conservation status of Chinese indigenous geese. Communications Biology. 2022, 5(1): 1191 .
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBAAW00000000 | - | AnserCy_1.0 | Draft genome in chromosome level | 2022-12-01 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,163,486,048 |
| GC content | 42.21% |
| Genome sequence No. | 2,242 |
| Maximum genome sequence length (bp) | 209,937,520 |
| Minimum genome sequence length (bp) | 4,593 |
| Average genome sequence length (bp) | 518,950 |
| Genome sequence N50 (bp) | 77,964,326 |
| Genome sequence N90 (bp) | 12,304,091 |