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Severe acute respiratory syndrome coronavirus 2
SARS_CoV-2_human_CHN_6342_2021
Scientific Name
Severe acute respiratory syndrome coronavirus 2
Common Names
-
Bioproject
PRJCA005689
Biosample
SAMC400172
Accession No.
GWHBDLN01000000
GWH reannotation accession
-
GSA raw reads
CRR343470
GVM variations of the species
16,114 (SNP)
,
820 (Indel)
Submitter Organization
GDCDC&GDIPH, Guangdong Provincial Center for Disease Control and Prevention
Contact
Baisheng Li, libsn@126.com
Sequence author(s)
Baisheng Li, Jing Lu
Released Date
2021-07-03
Assembly Level
Complete genome
Genome Representation
Full Genome
Assembly method
BWA 0.7.17-r1188
Sequencing & coverage
Illumina Miniseq 99
MGI 200 99
Download
DNA
GFF
RNA
Protein
Publication(s)
Baisheng Li, et al. Viral infection and transmission in a large, well-traced outbreak caused by theSARS-CoV-2 Delta variant. Nature Communications. 2022, 13.
History
Assembly Accession
GWH Reannotation Accession
Assembly Name
Assembly Level
Released Date
Download Files
GWHBDLN01000000
-
SARS_CoV-2_human_CHN_6342_2021
Complete genome
2021-07-03
DNA
GFF
RNA
Protein
GWH
Statistics of Genome Assembly
Genome size (bp)
29,821
GC content
37.98%
Annotation of Whole Genome Assembly
Protein
Total
Total
12
12