- Scientific Name
- Penicillium expansum T01
- Common Names
- -
- Bioproject
- PRJCA012775
- Biosample
- SAMC959368
- Accession No.
- GWHBOZT00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences
- Contact
- Boqiang Li, bqli@ibcas.ac.cn
- Sequence author(s)
- Boqiang Li
- Released Date
- 2022-11-08
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SOAPdenovo SOAPdenovo v. 1.05
- Sequencing & coverage
- Illumina HiSeq 2000 527.0
- Download
-
DNA
GFF
RNA
Protein
- Publication(s)
- Xiaodi Xu, et al. Histone H3K4 Methyltransferase PeSet1 Regulates Colonization, Patulin Biosynthesis, and Stress Responses of Penicillium expansum. Microbiology Spectrum. 2022.
Statistics of Genome Assembly
| Genome size (bp) | 33,183,628 |
| GC content | 47.23% |
| Scaffold sequence No. | 305 |
| Maximum scaffold sequence length (bp) | 9,171,487 |
| Minimum scaffold sequence length (bp) | 200 |
| Average scaffold sequence length (bp) | 108,799 |
| Scaffold N50 (bp) | 5,031,087 |
| Scaffold N90 (bp) | 2,109,518 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 10,949 | 10,949 |