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  • Triticum aestivum
  • CM42
    • Scientific Name
    Triticum aestivum
    Common Names
    Canadian hard winter wheat, common wheat, wheat; bread wheat; Triticum aestivum subsp. aestivum, Triticum vulgare
    Bioproject
    PRJCA021345
    Biosample
    SAMC3172727
    Accession No.
    GWHEQTW00000000
    GWH reannotation accession
    -
    GSA raw reads
    CRR962650, CRR962638, CRR962649, CRR962637, CRR962648,
    GVM variations of the species
    1,365,924 (SNP), 114,594 (Indel)
    Submitter Organization
    company, Academy of Mathematics and Systems Science, Chinese Academy of Sciences
    Contact
    Chengzhi Jiao, jiaocz1990@163.com
    Sequence author(s)
    Liyang Chen
    Released Date
    2024-10-16
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Assembly method
    Hifiasm Hifiasm 0.16.1
    Sequencing & coverage
    PacBio 30.0
    Download
    DNA GFF RNA Protein
    Publication(s)
    -
    Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
    GWHEQTW00000000 - CM42 Draft genome in scaffold level 2024-10-16 DNA GFF RNA Protein

    Statistics of Genome Assembly

    Genome size (bp) 14,656,108,654
    GC content 46.17%
    Chromosomes sequence No. 21
    Genome sequence No. 3,906
    Maximum genome sequence length (bp) 864,140,322
    Minimum genome sequence length (bp) 12,416
    Average genome sequence length (bp) 3,752,204
    Genome sequence N50 (bp) 722,680,826
    Genome sequence N90 (bp) 532,415,113
    Annotation of Whole Genome Assembly
    Protein Total
    Chromosome 132,151 132,151
    Others 1,240 1,240
    Total 133,391 133,391
    Annotation Details
    ChrID Protein Total
    chrA1 5,442 5,442
    chrA2 6,980 6,980
    chrA3 6,567 6,567
    chrA4 5,974 5,974
    chrA5 6,515 6,515
    chrA6 4,998 4,998
    chrA7 6,931 6,931
    chrB1 5,515 5,515
    chrB2 7,586 7,586
    chrB3 7,652 7,652
    chrB4 4,999 4,999
    chrB5 6,796 6,796
    chrB6 5,898 5,898
    chrB7 6,360 6,360
    chrD1 5,589 5,589
    chrD2 7,178 7,178
    chrD3 6,754 6,754
    chrD4 4,720 4,720
    chrD5 6,958 6,958
    chrD6 5,236 5,236
    chrD7 7,503 7,503
    Others 1,240 1,240
    Total 133,391 133,391