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  • Triticum aestivum
  • JM47
    • Scientific Name
    Triticum aestivum
    Common Names
    Canadian hard winter wheat, common wheat, wheat; bread wheat; Triticum aestivum subsp. aestivum, Triticum vulgare
    Bioproject
    PRJCA021345
    Biosample
    SAMC3172725
    Accession No.
    GWHEQTX00000000
    GWH reannotation accession
    -
    GSA raw reads
    CRR962681, CRR962692, CRR962680, CRR962691, CRR962683,
    GVM variations of the species
    1,365,924 (SNP), 114,594 (Indel)
    Submitter Organization
    company, Smartgenomics Technology Institute
    Contact
    Chengzhi Jiao, jiaocz1990@163.com
    Sequence author(s)
    Liyang Chen
    Released Date
    2024-10-17
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Assembly method
    Hifiasm Hifiasm 0.16.1
    Sequencing & coverage
    PacBio 30.0
    Download
    DNA GFF RNA Protein
    Publication(s)
    -
    Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
    GWHEQTX00000000 - JM47 Draft genome in scaffold level 2024-10-17 DNA GFF RNA Protein

    Statistics of Genome Assembly

    Genome size (bp) 15,045,816,769
    GC content 46.14%
    Chromosomes sequence No. 21
    Genome sequence No. 2,790
    Maximum genome sequence length (bp) 941,845,582
    Minimum genome sequence length (bp) 55,012
    Average genome sequence length (bp) 5,392,766
    Genome sequence N50 (bp) 744,228,505
    Genome sequence N90 (bp) 533,917,426
    Annotation of Whole Genome Assembly
    Protein Total
    Chromosome 134,851 134,851
    Others 1,431 1,431
    Total 136,282 136,282
    Annotation Details
    ChrID Protein Total
    chrA1 5,375 5,375
    chrA2 6,726 6,726
    chrA3 6,642 6,642
    chrA4 5,961 5,961
    chrA5 6,710 6,710
    chrA6 5,067 5,067
    chrA7 6,875 6,875
    chrB1 6,058 6,058
    chrB2 7,732 7,732
    chrB3 7,973 7,973
    chrB4 5,063 5,063
    chrB5 6,967 6,967
    chrB6 5,934 5,934
    chrB7 6,472 6,472
    chrD1 5,677 5,677
    chrD2 7,737 7,737
    chrD3 6,949 6,949
    chrD4 4,824 4,824
    chrD5 7,187 7,187
    chrD6 5,382 5,382
    chrD7 7,540 7,540
    Others 1,431 1,431
    Total 136,282 136,282