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  • Triticum aestivum
  • YM158
    • Scientific Name
    Triticum aestivum
    Common Names
    Canadian hard winter wheat, common wheat, wheat; bread wheat; Triticum aestivum subsp. aestivum, Triticum vulgare
    Bioproject
    PRJCA021345
    Biosample
    SAMC3172722
    Accession No.
    GWHEQUN00000000
    GWH reannotation accession
    -
    GSA raw reads
    CRR962807, CRR962806, CRR962809, CRR962808, CRR962803,
    GVM variations of the species
    1,365,924 (SNP), 114,594 (Indel)
    Submitter Organization
    company, Smartgenomics Technology Institute
    Contact
    Chengzhi Jiao, jiaocz1990@163.com
    Sequence author(s)
    Liyang Chen
    Released Date
    2024-10-17
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Assembly method
    Hifiasm Hifiasm 0.16.1
    Sequencing & coverage
    PacBio 30.0
    Download
    DNA GFF RNA Protein
    Publication(s)
    -
    Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
    GWHEQUN00000000 - YM158 Draft genome in scaffold level 2024-10-17 DNA GFF RNA Protein

    Statistics of Genome Assembly

    Genome size (bp) 14,702,635,128
    GC content 46.14%
    Chromosomes sequence No. 21
    Scaffold sequence No. 4,033
    Maximum scaffold sequence length (bp) 874,440,841
    Minimum scaffold sequence length (bp) 3,194
    Average scaffold sequence length (bp) 3,645,583
    Scaffold N50 (bp) 714,680,959
    Scaffold N90 (bp) 533,045,111
    Annotation of Whole Genome Assembly
    Protein Total
    Chromosome 133,777 133,777
    Others 1,430 1,430
    Total 135,207 135,207
    Annotation Details
    ChrID Protein Total
    chrA1 5,574 5,574
    chrA2 6,857 6,857
    chrA3 6,503 6,503
    chrA4 5,943 5,943
    chrA5 6,493 6,493
    chrA6 5,101 5,101
    chrA7 6,839 6,839
    chrB1 5,828 5,828
    chrB2 7,616 7,616
    chrB3 7,535 7,535
    chrB4 4,962 4,962
    chrB5 6,983 6,983
    chrB6 6,042 6,042
    chrB7 6,327 6,327
    chrD1 5,691 5,691
    chrD2 7,654 7,654
    chrD3 6,968 6,968
    chrD4 4,828 4,828
    chrD5 7,028 7,028
    chrD6 5,381 5,381
    chrD7 7,624 7,624
    Others 1,430 1,430
    Total 135,207 135,207