Genome Warehouse

Scientific Name: Lateolabrax maculatus
Common Names: spotted sea bass; Holocentrum maculatum, Labrax maculatus
Bioproject: PRJCA015925
Biosample: SAMC1173447
Accession No.: GWHCAYQ00000000
GWH reannotation accession: -
GSA raw reads: -
GVM variations of the species: -
Submitter Organization: College of Ocean and Earth Sciences, Xiamen University
Contact: Peng Xu(xupeng77@xmu.edu.cn)
Sequence author(s): Baohua Chen, Yue Shi, Peng Xu
Released Date: 2023-04-05
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: SOAPdenovo v2.04
3D-DNA 201008
Sequencing & coverage: Illumina HiSeq 2500 (short-insert size) 83.01
Illumina HiSeq 2500 (long-insert size) 105.86
Illumina HiSeq 2500 (Hi-C) 267.06
Download: DNA GFF RNA CDS Protein
Reannotation Download: -
Publication(s): Baohua Chen, et al. Genome-wide evolutionary signatures of climate adaptation in spotted sea bassinhabiting different latitudinal regions. Evolutionary Applications. 2023, 16(5): 1029-43.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHCAYQ00000000	-	LM_Ref_v1.5	Draft genome in chromosome level	2023-04-05	DNA GFF RNA CDS Protein

Genome size (bp)	597,611,097
GC content	40.90%
Chromosomes sequence No.	24
Genome sequence No.	1,393
Maximum genome sequence length (bp)	31,331,614
Minimum genome sequence length (bp)	798
Average genome sequence length (bp)	429,010
Genome sequence N50 (bp)	25,092,748
Genome sequence N90 (bp)	20,923,761

Annotation of Whole Genome Assembly

Annotation Details