- Scientific Name
- whole organism metagenome
- Common Names
- []
- Bioproject
- PRJCA018633
- Biosample
- SAMC3309629
- Accession No.
- GWHERDA00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- (SNP), (Indel)
- Submitter Organization
- Department of Bioinformatics and Systems Biology, Huazhong University of Science and Technology
- Contact
- Xue Zhu(zhuxue@hust.edu.cn)
- Sequence author(s)
- Xue Zhu
- Released Date
- 2028-01-15
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Partial Genome
- Assembly method
- MEGAHIT MEGAHIT (v1.1.2)
- Sequencing & coverage
- Illumina NovaSeq 6000 12.9
- Download
- -
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHERDA00000000 | - | MTC_Gene1 | Draft genome in contig level | 2028-01-15 |
|
Statistics of Genome Assembly
| Genome size (bp) | 132,389,655 |
| GC content | 45.09% |
| Contig sequence No. | 178,965 |
| Maximum contig sequence length (bp) | 13,551 |
| Minimum contig sequence length (bp) | 201 |
| Average contig sequence length (bp) | 740 |
| Contig N50 (bp) | 1,005 |
| Contig N90 (bp) | 354 |