- Scientific Name
- Cannabis sativa
- Common Names
- []
- Bioproject
- PRJCA015041
- Biosample
- SAMC1098000
- Accession No.
- GWHBWDA00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- (SNP), (Indel)
- Submitter Organization
- College of Life Sciences, Fujian Agriculture and Forestry University
- Contact
- Yuanyuan Liu(yyliu@fafu.edu.cn)
- Sequence author(s)
- Sen Cai
- Released Date
- 2027-02-24
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Falcon 0.5
- Sequencing & coverage
- PacBio 94.72
- Download
- -
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBWDA00000000 | - | CSLZ | Draft genome in chromosome level | 2027-02-24 |
|
Statistics of Genome Assembly
| Genome size (bp) | 737,196,607 |
| GC content | 34.20% |
| Chromosomes sequence No. | 10 |
| Genome sequence No. | 12 |
| Maximum genome sequence length (bp) | 79,930,360 |
| Minimum genome sequence length (bp) | 4,777,215 |
| Average genome sequence length (bp) | 61,433,051 |
| Genome sequence N50 (bp) | 75,647,131 |
| Genome sequence N90 (bp) | 54,365,033 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 36,619 | 36,619 |
| Others | 1,692 | 1,692 |
| Total | 38,311 | 38,311 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 3,683 | 3,683 |
| chr10 | 3,840 | 3,840 |
| chr2 | 2,932 | 2,932 |
| chr3 | 4,194 | 4,194 |
| chr4 | 3,591 | 3,591 |
| chr5 | 4,548 | 4,548 |
| chr6 | 3,046 | 3,046 |
| chr7 | 3,374 | 3,374 |
| chr8 | 3,420 | 3,420 |
| chr9 | 3,991 | 3,991 |
| Others | 1,692 | 1,692 |
| Total | 38,311 | 38,311 |