- Scientific Name
- Aphis gossypii
- Common Names
- melon aphid; cotton aphid; []
- Bioproject
- PRJCA025252
- Biosample
- SAMC3513480
- Accession No.
- GWHESEX00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- (SNP), (Indel)
- Submitter Organization
- College of plant protection, Yangzhou University
- Contact
- Shuai Zhang(shuaizhang@yzu.edu.cn)
- Sequence author(s)
- Shuai Zhang
- Released Date
- 2024-04-15
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- ABySS Hifiasm (v0.16)
- Sequencing & coverage
- PacBio 79.0
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHESEX00000000 | - | Hap4 | Draft genome in chromosome level | 2024-04-15 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 321,241,862 |
| GC content | 27.32% |
| Chromosomes sequence No. | 2 |
| Genome sequence No. | 4 |
| Maximum genome sequence length (bp) | 92,943,508 |
| Minimum genome sequence length (bp) | 55,973,598 |
| Average genome sequence length (bp) | 80,310,466 |
| Genome sequence N50 (bp) | 89,913,262 |
| Genome sequence N90 (bp) | 55,973,598 |