- Scientific Name
- Arabidopsis thaliana
- Common Names
- mouse-ear cress, thale-cress; thale cress; Arabis thaliana
- Bioproject
- PRJNA13190
- Biosample
- SAMN03081413
- Accession No.
- GCA_000211275.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Arabidopsis Genome Initiative
- Released Date
- 2023-10-23
- NCBI Released Date
- 2004-11-05
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Partial Genome ( Nuclear )
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 93,654,490 |
| Chromosomes, organellas and plasmids sequnece No. | 6 |
| Genome sequence No. | 6 |
| GC content | 36 |
| Scaffold sequence No. | 6 |
| Scaffold L50 | 2 |
| Scaffold N50 (bp) | 23,403,063 |
| Scaffold N75 (bp) | 14,497,843 |
| Scaffold N90 (bp) | 14,221,815 |
| Contig sequence No. | 56 |
| Contig L50 | 4 |
| Contig N50 (bp) | 11,855,703 |
| Unique components No. | 1,204 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 50 |
| Ns gap sequence region length (bp) | 3,403 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 13000 | 137 | 0 | 0 | 91 | 3614 | 16842 |