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  • Arabidopsis thaliana
  • Ler Assembly
    • Scientific Name
    Arabidopsis thaliana
    Common Names
    mouse-ear cress, thale-cress; thale cress; Arabis thaliana
    Bioproject
    PRJNA311266
    Biosample
    SAMN04457953
    Accession No.
    GCA_001651475.1
    RefSeq Accession No.
    -
    RefSeq vs GenBank similarity
    -
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    Center for genomic Regulation
    Released Date
    2023-10-27
    NCBI Released Date
    2016-05-27
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA CDS Protein
    RefSeq Download
    -
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_001651475.1 - - Ler Assembly Draft genome in scaffold level 2016-05-27 DNA GFF RNA CDS Protein

    Statistics of Genome Assembly

    Genome size (bp) 118,890,721
    Chromosomes, organellas and plasmids sequnece No. 7
    Genome sequence No. 30
    GC content 36
    Scaffold sequence No. 30
    Scaffold L50 3
    Scaffold N50 (bp) 22,588,203
    Scaffold N75 (bp) 19,037,554
    Scaffold N90 (bp) 17,980,856
    Contig sequence No. 525
    Contig L50 27
    Contig N50 (bp) 1,193,183
    Unique components No. 30
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 495
    Ns gap sequence region length (bp) 1,777,525
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 26966 0 0 0 0 204 27170