- Scientific Name
- Zea mays
- Common Names
- maize; Zea mays var. japonica
- Bioproject
- PRJNA10769
- Biosample
- SAMN04296295
- Accession No.
- GCA_000005005.6
- RefSeq Accession No.
- GCF_000005005.2
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- maizesequence
- Released Date
- 2023-12-11
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_000005005.6 | GCF_000005005.2 | different | B73 RefGen_v4 | Draft genome in scaffold level | 2017-02-07 | DNA GFF RNA Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 2,134,373,047 |
| Chromosomes, organellas and plasmids sequnece No. | 10 |
| Genome sequence No. | 265 |
| Scaffold sequence No. | 596 |
| Scaffold L50 | 62 |
| Scaffold N50 (bp) | 10,679,170 |
| Scaffold N75 (bp) | 6,157,474 |
| Scaffold N90 (bp) | 3,077,178 |
| Contig sequence No. | 2,787 |
| Contig L50 | 506 |
| Contig N50 (bp) | 1,279,870 |
| Unique components No. | 3,128 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 2,191 |
| Ns gap sequence region length (bp) | 30,732,878 |
| Gaps No. between scaffolds | 331 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 39320 | 0 | 0 | 0 | 0 | 0 | 39320 |