- Scientific Name
- Arabidopsis thaliana
- Common Names
- mouse-ear cress, thale-cress; thale cress; Arabis thaliana
- Bioproject
- PRJEB31147
- Biosample
- SAMEA5751958
- Accession No.
- GCA_902651935.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- MAX PLANCK INSTITUTE FOR PLANT BREEDING RESEARCH
- Released Date
- 2023-10-23
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 120,129,838 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 111 |
| GC content | 36 |
| Scaffold sequence No. | 111 |
| Scaffold L50 | 3 |
| Scaffold N50 (bp) | 23,034,411 |
| Scaffold N75 (bp) | 19,417,579 |
| Scaffold N90 (bp) | 18,785,460 |
| Contig sequence No. | 151 |
| Contig L50 | 6 |
| Contig N50 (bp) | 8,166,377 |
| Unique components No. | 111 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 40 |
| Ns gap sequence region length (bp) | 20,000 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 27193 | 0 | 0 | 0 | 2 | 0 | 27195 |