Dataset - HemAtlas

HemAtlas

HemSC00000015

Dataset Information

Omics:

Single cell RNA-seq

Omics Detail:

10x Genomics

Species:

Human

Organ:

AGM (aorta-gonad-mesonephros)

Cell Number:

1057

Gene Number:

17218

Genome Reference:

hg19

Data Normalization:

SCT

Sequencing Platform:

Illumina Hiseq X Ten

Cell Sorting Strategies:

Human embryonic body, caudal half and AGM region were isolated.The following antibodies were used: CD45 (BD Biosciences, 563879), CD34 (BD Biosciences, 555821), CD235a CD44 (BD Biosciences, 562991) and 7-AAD

Publication

Tracing the first hematopoietic stem cell generation in human embryo by single-cell RNA sequencing.

Zeng Y, He J, Bai Z, Li Z, Gong Y, Liu C, Ni Y, Du J, Ma C, Bian L, Lan Y, Liu B.
Volume:29 Issue:11 Cell research | 2019-09-09 | [31501518]

Visualization

Select Gene(s):

Please select gene!

Select Gene(s):

Species	Dataset	Gene	P.value	logFC	adj.P.val	Stage	Cell type	Cluster

Species	Stage	Dataset	Source	Target	Communication probability	P value	Ligand	Receptor	Interact Name

HemAtlas
Mapping developmental hematopoiesis across stages, species and models

HemSC00000015

Dataset Information

Publication

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

Cell Interaction

HemAtlas Mapping developmental hematopoiesis across stages, species and models

HemSC00000015

Dataset Information

Publication

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

Cell Interaction

HemAtlas
Mapping developmental hematopoiesis across stages, species and models