Dataset - HemAtlas

HemAtlas

HemSC00000032

Dataset Information

Omics:

Single cell RNA-seq

Omics Detail:

Smart seq2

Species:

Human

Organ:

Bone marrow

Cell Number:

3056

Gene Number:

25779

Genome Reference:

GRCh38

Data Normalization:

SCT

Sequencing Platform:

HiSeq4000 and NovaSeq6000

Cell Sorting Strategies:

CD34+ or CD45+ cells

Publication

Integrative Single-Cell RNA-Seq and ATAC-Seq Analysis of Human Developmental Hematopoiesis.

Ranzoni AM, Tangherloni A, Berest I, Riva SG, Myers B, Strzelecka PM, Xu J, Panada E, Mohorianu I, Zaugg JB, Cvejic A.
Volume:28 Issue:3 Cell stem cell | 2020-12-21 | [33352111]

Visualization

Select Gene(s):

Please select gene!

Select Gene(s):

Species	Dataset	Gene	P.value	logFC	adj.P.val	Stage	Cell type	Cluster

Species	Stage	Dataset	Source	Target	Communication probability	P value	Ligand	Receptor	Interact Name

HemAtlas
Mapping developmental hematopoiesis across stages, species and models

HemSC00000032

Dataset Information

Publication

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

Cell Interaction

HemAtlas Mapping developmental hematopoiesis across stages, species and models

HemSC00000032

Dataset Information

Publication

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

Cell Interaction

HemAtlas
Mapping developmental hematopoiesis across stages, species and models