Dataset - HemAtlas

HemAtlas

HemSC00000041

Dataset Information

Omics:

Single cell RNA-seq

Omics Detail:

10x Genomics

Species:

Mouse

Organ:

Fetal liver

Cell Number:

32449

Gene Number:

31053

Genome Reference:

mm10

Data Normalization:

SCT

Sequencing Platform:

10x Genomics

Cell Sorting Strategies:

At E11.5, CD45+ HCs9,73 and CD45– non-HCs were pooled together for sequencing. At E12.5, E13.5, and E14.5, LSK cells74,75, CD45+ HCs, CD45–CD31+ ECs,76 and CD45–CD31– NCs were pooled together for sequencing.

Publication

Identification of HSC/MPP expansion units in fetal liver by single-cell spatiotemporal transcriptomics.

Gao S, Shi Q, Zhang Y, Liang G, Kang Z, Huang B, Ma D, Wang L, Jiao J, Fang X, Xu CR, Liu L, Xu X, Göttgens B, Li C, Liu F.
Volume: Issue: Cell research | 2021-08-02 | [34341490]

Visualization

Select Gene(s):

Please select gene!

Select Gene(s):

Species	Dataset	Gene	P.value	logFC	adj.P.val	Stage	Cell type	Cluster

Species	Stage	Dataset	Source	Target	Communication probability	P value	Ligand	Receptor	Interact Name

HemAtlas
Mapping developmental hematopoiesis across stages, species and models

HemSC00000041

Dataset Information

Publication

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

Cell Interaction

HemAtlas Mapping developmental hematopoiesis across stages, species and models

HemSC00000041

Dataset Information

Publication

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

Cell Interaction

HemAtlas
Mapping developmental hematopoiesis across stages, species and models