HemAtlas
Mapping developmental hematopoiesis across stages, species and models

HemSC00000079

Dataset Information

Omics:
Single cell RNA-seq
Omics Detail:
STRT-seq
Species:
Human
Organ:
Bone marrow
Cell Number:
7551
Gene Number:
17659
Genome Reference:
hg38
Data Normalization:
SCT
Sequencing Platform:
STRT-seq
Cell Sorting Strategies:
Human blood cells including CD34+ HSPCs, B cells, NK cells, T cells, monocytes, neutrophils and erythrocytes, were derived from the bone marrow and peripheral blood (only regulatory B, naive B, memory B, cytotoxic NK, cytokine NK and T cells were derived from peripheral blood) of 21 healthy adult donor

Publication

Single-cell transcriptomic landscape of human blood cells.

Xie X, Liu M, Zhang Y, Wang B, Zhu C, Wang C, Li Q, Huo Y, Guo J, Xu C, Hu L, Pang A, Ma S, Wang L, Cao W, Chen S, Li Q, Zhang S, Zhao X, Zhou W, Luo H, Zheng G, Jiang E, Feng S, Chen L, Shi L, Cheng H, Hao S, Zhu P, Cheng T.
Volume:8 Issue:3 National science review | 2020-08-24 | [34691592]

Visualization

Annotation

Gene Expression (Feature plot)

Gene Expression (Violin plot)

B natural killer cellCD4+ T cellCD8+ T cellMonocyteCommon lymphoid progenitorCommon monocyte progenitorCommon myeloid progenitorErythroid cellGranulocyte-Monocyte progenitorMonocyte-Dendritic cell progenitorHematopoietic stem cellB cellNatural killer cellLymphoid-primed multipotent progenitorNeutrophilMegakaryocyte-erythroid progenitormulti-lymphoid progenitormultipotent progenitorNatural killer progenitorPlasma cellPrecursor of B cellPrecursor of Monocytepro-B cellpro-neutrophilRegulatory B cell0246810121416
B natural killer cellCD4+ T cellCD8+ T cellMonocyteCommon lymphoid progenitorCommon monocyte progenitorCommon myeloid progenitorErythroid cellGranulocyte-Monocyte progenitorMonocyte-Dendritic cell progenitorHematopoietic stem cellB cellNatural killer cellLymphoid-primed multipotent progenitorNeutrophilMegakaryocyte-erythroid progenitormulti-lymphoid progenitormultipotent progenitorNatural killer progenitorPlasma cellPrecursor of B cellPrecursor of Monocytepro-B cellpro-neutrophilRegulatory B cellvalue

Select Gene(s):

Gene Expression (Dot plot)

Differentially Expressed Genes

GO Enrichment

No data available.

Cell Interaction

No niche cells in this data.