| Description | File Name | File Size |
|---|---|---|
| New! Description for LncRNA GTF format | README.txt | 8.0 KB |
| New! Merged GTF file; 526,318 lncRNA transcripts of LncBook v2.1 | lncRNA_LncBookv2.1_GRCh38.gtf.gz | 28 MB |
| New! FASTA sequences of LncBook v2.1 lncRNA transcripts; 526,318 sequences | lncRNA_LncBookv2.1_GRCh38.fa.gz | 156 MB |
| Merged GTF file; 95,243 lncRNA genes of LncBook v2.0 and 43,770 other types of genes from GENCODE v34 | LncBookv2.0_GENCODEv34_GRCh38.gtf.gz | 57.84 MB |
| Curated based on LncBook v1.9; 95,243 lncRNA genes | lncRNA_LncBookv2.0_GRCh38.gtf.gz | 15.20 MB |
| FASTA sequences of LncBook v2.0 lncRNA transcripts; 323,950 sequences | lncRNA_LncBookv2.0.fa.gz | 107.47 MB |
| Merged GTF file; 101,293 lncRNA genes of LncBook v1.9, and 19,957 protein coding genes from GENCODE v33; reference for LncExpDB analysis | LncBookv1.9_GENCODEv33_GRCh38.gtf.gz | 54.11 MB |
| 101,293 lncRNA genes | lncRNA_LncBookv1.9_GRCh38.gtf.gz | 14.90 MB |
| FASTA sequences of LncBook v1.9 lncRNA transcripts; 331,420 sequences | lncRNA_LncBookv1.9.fa.gz | 108.67 MB |
| Omics | File Name | File Size |
|---|---|---|
| Conservation | conservation_LncBook2.0.csv.gz | 47 MB |
| Variation | variation_LncBook2.0.csv.gz | 16 MB |
| Methylation | methylation_LncBook2.0.csv.gz | 0.1 MB |
| Expression | expression_LncBook2.0.csv.gz | 0.6MB |
| Small Protein | sprotein_LncBook2.0.csv.gz | 2.0 MB |
| Interaction |
miRanda_LncBook2.0.txt.gz RNAhybrid_LncBook2.0.txt.gz TargetScan_LncBook2.0.txt.gz lncrna_mirna_TargetScanAndRNAhybrid_LncBook2.0.csv.gz lncrna_mirna_miRandaAndRNAhybrid_LncBook2.0.csv.gz lncrna_mirna_miRandaAndTargetScan_LncBook2.0.csv.gz lncrna_mirna_miRandaAndTargetScanAndRNAhybrid_LncBook2.0.csv.gz lncrna_rbp_LncBook2.0.csv.gz |
0.9 GB
6.5 MB 0.3 GB 1.8 MB 5.9 MB 2.0 GB 1.7 MB 5.7 MB |