Basic information
Locus name	AT5G01550
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification:protein kinase and phosphatases
Effect for Senescence	unclear
Gene Description	lectin protein kinase, putative similar to receptor lectin kinase 3 [Arabidopsis thaliana] gi|4100060|gb|AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF00139
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process protein phosphorylation molecular function ATP binding carbohydrate binding protein kinase activity protein serine/threonine kinase activity
Sequence	AT5G01550.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_160217	Accession Taxon NP_187499 Arabidopsis thaliana NP_195774 Arabidopsis thaliana NP_195775 ( AT5G01550 ) Arabidopsis thaliana NP_195776 Arabidopsis thaliana NP_001057114 Oryza sativa Japonica Group NP_001065157 Oryza sativa Japonica Group 29820.m000984 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description Pfam PF00139 1.3E-69 24 271 IPR001220 Legume lectin domain SUPERFAMILY SSF49899 7.0E-61 24 291 IPR008985 Concanavalin A-like lectin/glucanases superfamily PANTHER PTHR24420 0.0 162 667 No hit NA SUPERFAMILY SSF56112 2.8E-77 342 631 IPR011009 Protein kinase-like domain ProSiteProfiles PS50011 39.9 361 640 IPR000719 Protein kinase, catalytic domain SMART SM00220 1.4E-38 361 631 IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain Pfam PF00069 7.6E-48 362 570 IPR000719 Protein kinase, catalytic domain ProSitePatterns PS00107 NA 367 392 IPR017441 Protein kinase, ATP binding site ProSitePatterns PS00108 NA 486 498 IPR008271 Serine/threonine-protein kinase, active site
Subcellular Localization
Localization	plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787