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| Locus name | AT1G77280 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Protein degradation/modification:protein kinase and phosphatases |
| Effect for Senescence | unclear |
| Gene Description | protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Gene Ontology | |
| Sequence | AT1G77280.1 | Genomic | mRNA | CDS | Protein
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
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| Details | | target: AT1G77280.1
miRNA: ath-miR390a
miRNA: ath-miR390a
mfe: -30.7 kcal/mol
p-value: 0.015313
position: 1899
target 5' C C A 3'
GGCGUUGU UCUCCU GAGUU
CCGCGAUA GGAGGA CUCGA
miRNA 3' G A 5'
target: AT1G77280.1
miRNA: ath-miR390b
miRNA: ath-miR390b
mfe: -30.7 kcal/mol
p-value: 0.016815
position: 1899
target 5' C C A 3'
GGCGUUGU UCUCCU GAGUU
CCGCGAUA GGAGGA CUCGA
miRNA 3' G A 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_144933 | |
| Cross Link | |
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