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| Locus name | AT3G08760 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Protein degradation/modification:protein kinase and phosphatases |
| Effect for Senescence | unclear |
| Gene Description | protein kinase family protein contains protein kinase domain, Pfam:PF00069 |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Gene Ontology | |
| Sequence | AT3G08760.1 | Genomic | mRNA | CDS | Protein
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
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| Details | | target: AT3G08760.1
miRNA: ath-miR781
miRNA: ath-miR781
mfe: -21.7 kcal/mol
p-value: 0.137576
position: 643
target 5' G A G G 3'
AAG AUU GGGAAGCUUUAA
UUC UAG UCUUUUGAGAUU
miRNA 3' A A G 5'
target: AT3G08760.1
miRNA: ath-miR830
miRNA: ath-miR830
mfe: -21.3 kcal/mol
p-value: 0.015980
position: 1370
target 5' A G A 3'
UA UUCUUCUUGAGAU GUUA
GU AAGAAGAGUUUUA CAAU
miRNA 3' G U 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_164513 | |
| Cross Link | |
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