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| Locus name | AT5G10770 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Protein degradation/modification |
| Effect for Senescence | unclear |
| Gene Description | chloroplast nucleoid DNA-binding protein, putative similar to CND41, chloroplast nucleoid DNA binding protein [Nicotiana tabacum] GI:2541876; contains Pfam profile PF00026: Eukaryotic aspartyl protease |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Gene Ontology | |
| Sequence | AT5G10770.1 | Genomic | mRNA | CDS | Protein
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
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| Details | | target: AT5G10770.1
miRNA: ath-miR5658
miRNA: ath-miR5658
mfe: -28.0 kcal/mol
p-value: 0.001531
position: 245
target 5' C G 3'
UUCAUCAUCAUCAUC UUGU
AAGUAGUAGUAGUAG AGUA
miRNA 3' A U 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_164610 | |
| Cross Link | |
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| Localization | extracellular |
| Evidence | SUBAcon |
| Pubmed ID | 23180787 |
