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| Locus name | AT3G27110 |
| Alias | PGM48 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | protein modification |
| Effect for Senescence | promote |
| Gene Description | PGM48 is a member of a plant specific clade of metallo-endopeptidase proteins |
| Evidence | Genetic evidence:transgene [Ref 1] |
| References | 1: Bhuiyan NH, Friso G, Rowland E, Majsec K, van Wijk KJ.The Plastoglobule-Localized Metallopeptidase PGM48 Is a Positive Regulator of Senescence in Arabidopsis thaliana.Plant Cell. 2016 Dec;28(12):3020-3037. doi: 10.1105/tpc.16.00745. Epub 2016 Nov 28. |
| Gene Ontology | |
| Sequence | AT3G27110.1 | Genomic | mRNA | CDS | Protein
AT3G27110.2 | Genomic | mRNA | CDS | Protein
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
Ortholog Group  | |
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| Ortholog Groups: OG5_149678 | |
| Cross Link | |
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| Localization | plastid |
| Evidence | SUBAcon |
| Pubmed ID | 23180787 |
