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About
Basic information   
Locus name AT3G10450
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryProtein degradation/modification
Effect for Senescenceunclear
Gene Descriptionserine carboxypeptidase S10 family protein similar to glucose acyltransferase GB:AAD01263 [Solanum berthaultii]; also similar to serine carboxypeptidase I GB:P37890 [Oryza sativa]
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
biological process
molecular function
SequenceAT3G10450.1 | Genomic | mRNA | CDS | Protein
AT3G10450.2 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
miRNA Interaction      
Details
target: AT3G10450.1 
miRNA: ath-miR157d
miRNA: ath-miR157d
mfe: -25.2 kcal/mol 
p-value: 0.010745 

position:  267 
target 5' U     U          G   U 3' 
           UGCUC UCUAUCU CU GUC  
           ACGAG AGAUAGA GA CAG  
miRNA  3' C             A      U 5' 
target: AT3G10450.1 
miRNA: ath-miR847
miRNA: ath-miR847
mfe: -25.9 kcal/mol 
p-value: 0.020692 

position:  165 
target 5' U     U          A    C 3' 
           GUUGG GAGGAAGAGG AGUG  
           UAGUU CUUCUUCUCC UCAC  
miRNA  3' G                     U 5' 
target: AT3G10450.2 
miRNA: ath-miR157d
miRNA: ath-miR157d
mfe: -25.2 kcal/mol 
p-value: 0.011433 

position:  359 
target 5' U     U          G   U 3' 
           UGCUC UCUAUCU CU GUC  
           ACGAG AGAUAGA GA CAG  
miRNA  3' C             A      U 5' 
target: AT3G10450.2 
miRNA: ath-miR847
miRNA: ath-miR847
mfe: -25.9 kcal/mol 
p-value: 0.022056 

position:  257 
target 5' U     U          A    C 3' 
           GUUGG GAGGAAGAGG AGUG  
           UAGUU CUUCUUCUCC UCAC  
miRNA  3' G                     U 5' 
Ortholog Group      
Ortholog Groups: OG5_131655
AccessionTaxon
NP_001030669Arabidopsis thaliana
NP_001031401Arabidopsis thaliana
NP_001031402Arabidopsis thaliana
NP_001077945Arabidopsis thaliana
NP_001077946Arabidopsis thaliana
NP_001077947Arabidopsis thaliana
NP_001154529Arabidopsis thaliana
NP_174619Arabidopsis thaliana
NP_177470Arabidopsis thaliana
NP_177471Arabidopsis thaliana
NP_177472Arabidopsis thaliana
NP_177473Arabidopsis thaliana
NP_177474Arabidopsis thaliana
NP_179876Arabidopsis thaliana
NP_179880Arabidopsis thaliana
NP_179881Arabidopsis thaliana
NP_179883Arabidopsis thaliana
NP_179884Arabidopsis thaliana
NP_187656 ( AT3G10450 ) Arabidopsis thaliana
NP_187828Arabidopsis thaliana
NP_187831Arabidopsis thaliana
NP_187832Arabidopsis thaliana
NP_198467Arabidopsis thaliana
NP_565546Arabidopsis thaliana
NP_566414Arabidopsis thaliana
NP_568215Arabidopsis thaliana
NP_850033Arabidopsis thaliana
NP_850034Arabidopsis thaliana
NP_850035Arabidopsis thaliana
NP_850036Arabidopsis thaliana
NP_973516Arabidopsis thaliana
NP_973517Arabidopsis thaliana
NP_001052165Oryza sativa Japonica Group
NP_001064014Oryza sativa Japonica Group
NP_001064015Oryza sativa Japonica Group
NP_001067860Oryza sativa Japonica Group
NP_001067861Oryza sativa Japonica Group
29661.m000940Ricinus communis
30099.m001720Ricinus communis
30099.m001722Ricinus communis
30099.m001724Ricinus communis
30170.m013597Ricinus communis
30170.m013598Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR118021.8E-2579437IPR001563Peptidase S10, serine carboxypeptidase
SUPERFAMILYSSF534741.8E-11629436No hitNA
PfamPF004507.2E-13233434IPR001563Peptidase S10, serine carboxypeptidase
PRINTSPR007242.8E-19114126IPR001563Peptidase S10, serine carboxypeptidase
PRINTSPR007242.8E-19127137IPR001563Peptidase S10, serine carboxypeptidase
PRINTSPR007242.8E-19162187IPR001563Peptidase S10, serine carboxypeptidase
PRINTSPR007242.8E-19405418IPR001563Peptidase S10, serine carboxypeptidase
Subcellular Localization   
Localization 1
Localizationextracellular
EvidenceSUBAcon
Pubmed ID23180787
Localization 2
Localizationvacuole
EvidenceSUBAcon
Pubmed ID23180787