Basic information
Locus name	AT5G22860
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	serine carboxypeptidase S28 family protein contains Pfam profile: PF05577 serine carboxypeptidase S28
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process proteolysis molecular function serine-type peptidase activity
Sequence	AT5G22860.1 | Genomic | mRNA | CDS | Protein AT5G22860.2 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_178069	Accession Taxon NP_197677 Arabidopsis thaliana NP_851059 ( AT5G22860 ) Arabidopsis thaliana 29589.m001290 Ricinus communis 29589.m001292 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11010 0.0 1 500 IPR008758 Peptidase S28 Pfam PF05577 3.0E-71 61 479 IPR008758 Peptidase S28 SUPERFAMILY SSF53474 2.0E-26 114 461 No hit NA