Basic information
Locus name	AT5G48400
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Nutrient recycling
Effect for Senescence	unclear
Gene Description	glutamate receptor family protein (GLR1.2) plant glutamate receptor family, PMID:11379626
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process transport cellular component membrane molecular function extracellular-glutamate-gated ion channel activity ionotropic glutamate receptor activity transporter activity
Sequence	AT5G48400.1 | Genomic | mRNA | CDS | Protein AT5G48400.2 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_170491	Accession Taxon NP_187061 Arabidopsis thaliana NP_187408 Arabidopsis thaliana NP_199651 ( AT5G48400 ) Arabidopsis thaliana NP_199652 Arabidopsis thaliana NP_851155 Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR18966 0.0 7 738 No hit NA PIRSF PIRSF037090 0.0 8 750 IPR017103 Ionotropic glutamate receptor, plant SUPERFAMILY SSF53822 2.7E-62 40 431 No hit NA Pfam PF01094 2.7E-45 58 385 IPR001828 Extracellular ligand-binding receptor SUPERFAMILY SSF53850 1.2E-24 419 565 No hit NA SMART SM00079 6.0E-7 443 750 IPR001320 Ionotropic glutamate receptor Pfam PF00497 3.3E-12 470 735 IPR001638 Extracellular solute-binding protein, family 3 Pfam PF00060 1.7E-21 562 653 IPR001320 Ionotropic glutamate receptor SUPERFAMILY SSF53850 1.2E-24 660 738 No hit NA
Subcellular Localization
Localization	plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787