Basic information   
Locus name AT3G08860
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryLipid/Carbohydrate metabolism
Effect for Senescenceunclear
Gene Descriptionalanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative similar to similar to SP|Q64565 Alanine--glyoxylate aminotransferase 2, mitochondrial precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate aminotransferase) {Rattus norvegicus}; contains Pfam profile PF00202: aminotransferase, class III
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
molecular function
SequenceAT3G08860.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_128761
AccessionTaxon
NP_181374Arabidopsis thaliana
NP_187498 ( AT3G08860 ) Arabidopsis thaliana
NP_568064Arabidopsis thaliana
119395Chlamydomonas reinhardtii
133057Chlamydomonas reinhardtii
NP_001049115Oryza sativa Japonica Group
NP_001050053Oryza sativa Japonica Group
NP_001055831Oryza sativa Japonica Group
estExt_gwp_gw1.C_320115Physcomitrella patens subsp. patens
28196.m000210Ricinus communis
30015.m000215Ricinus communis
XP_002946908Volvox carteri f. nagariensis
XP_002950328Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR119862.1E-2581481IPR005814Aminotransferase class-III
PIRSFPIRSF0005214.4E-1517481No hitNA
SUPERFAMILYSSF533832.7E-11774479IPR015424Pyridoxal phosphate-dependent transferase
PfamPF002021.1E-8486418IPR005814Aminotransferase class-III
ProSitePatternsPS00600NA292330IPR005814Aminotransferase class-III
Subcellular Localization   
Localizationmitochondrion
EvidenceSUBAcon
Pubmed ID23180787