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About
Basic information   
Locus name AT4G34860
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryLipid/Carbohydrate metabolism
Effect for Senescenceunclear
Gene Descriptionbeta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
molecular function
SequenceAT4G34860.1 | Genomic | mRNA | CDS | Protein
AT4G34860.2 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
miRNA Interaction      
Details
target: AT4G34860.1 
miRNA: ath-miR1886
miRNA: ath-miR1886
mfe: -19.0 kcal/mol 
p-value: 0.294455 

position:  1258 
target 5' C        G      A     A 3' 
           GUAGGAUG GAGUUU UGGUU  
           CAUUCUAC UUUAGA AUUAA  
miRNA  3' U               A       5' 
target: AT4G34860.2 
miRNA: ath-miR1886
miRNA: ath-miR1886
mfe: -19.0 kcal/mol 
p-value: 0.276069 

position:  1142 
target 5' C        G      A     A 3' 
           GUAGGAUG GAGUUU UGGUU  
           CAUUCUAC UUUAGA AUUAA  
miRNA  3' U               A       5' 
Ortholog Group      
Ortholog Groups: OG5_136213
AccessionTaxon
NP_001031143Arabidopsis thaliana
NP_001031790 ( AT4G34860 ) Arabidopsis thaliana
NP_174791Arabidopsis thaliana
NP_177345Arabidopsis thaliana
NP_195212Arabidopsis thaliana
NP_564177Arabidopsis thaliana
NP_567347Arabidopsis thaliana
NP_849750Arabidopsis thaliana
NP_974525Arabidopsis thaliana
NP_001047095Oryza sativa Japonica Group
NP_001052830Oryza sativa Japonica Group
NP_001065878Oryza sativa Japonica Group
e_gw1.227.15.1Physcomitrella patens subsp. patens
e_gw1.245.69.1Physcomitrella patens subsp. patens
e_gw1.333.8.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_2610014Physcomitrella patens subsp. patens
estExt_Genewise1.C_320103Physcomitrella patens subsp. patens
29711.m000330Ricinus communis
29728.m000799Ricinus communis
29836.m000583Ricinus communis
30170.m014184Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR319160.01570No hitNA
PfamPF128995.2E-222109545IPR024746Glycosyl hydrolase family 100
SUPERFAMILYSSF482086.5E-59110352IPR008928Six-hairpin glycosidase-like
SUPERFAMILYSSF482086.5E-59380538IPR008928Six-hairpin glycosidase-like
Subcellular Localization   
Localizationcytosol,plastid
EvidenceSUBAcon
Pubmed ID23180787