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Locus name | AT4G34860 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Lipid/Carbohydrate metabolism |
Effect for Senescence | unclear |
Gene Description | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to neutral invertase [Daucus carota] GI:4200165; contains Pfam profile PF04853: Plant neutral invertase |
Evidence | Genomic evidence:microarray data [Ref 1] |
References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
Gene Ontology | |
Sequence | AT4G34860.1 | Genomic | mRNA | CDS | Protein AT4G34860.2 | Genomic | mRNA | CDS | Protein
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Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4) |
Comparation |
Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction | |
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Details | | target: AT4G34860.1 miRNA: ath-miR1886 miRNA: ath-miR1886 mfe: -19.0 kcal/mol p-value: 0.294455
position: 1258 target 5' C G A A 3' GUAGGAUG GAGUUU UGGUU CAUUCUAC UUUAGA AUUAA miRNA 3' U A 5'
target: AT4G34860.2 miRNA: ath-miR1886 miRNA: ath-miR1886 mfe: -19.0 kcal/mol p-value: 0.276069
position: 1142 target 5' C G A A 3' GUAGGAUG GAGUUU UGGUU CAUUCUAC UUUAGA AUUAA miRNA 3' U A 5'
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Ortholog Group | |
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Ortholog Groups: OG5_136213 | |
Cross Link | |
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Localization | cytosol,plastid |
Evidence | SUBAcon |
Pubmed ID | 23180787 |