Basic information
Locus name	AT1G02310
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Lipid/Carbohydrate metabolism
Effect for Senescence	unclear
Gene Description	glycosyl hydrolase family protein 5 / cellulase family protein / (1-4)-beta-mannan endohydrolase, putative similar to (1-4)-beta-mannan endohydrolase precursor GI:9836826 from [Lycopersicon esculentum]
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process carbohydrate metabolic process molecular function hydrolase activity, hydrolyzing O-glycosyl compounds
Sequence	AT1G02310.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_130289	Accession Taxon NP_171733 ( AT1G02310 ) Arabidopsis thaliana NP_179660 Arabidopsis thaliana NP_187700 Arabidopsis thaliana NP_187701 Arabidopsis thaliana NP_189675 Arabidopsis thaliana NP_194561 Arabidopsis thaliana NP_195813 Arabidopsis thaliana NP_201447 Arabidopsis thaliana 152688 Chlamydomonas reinhardtii 171220 Chlamydomonas reinhardtii 205906 Chlamydomonas reinhardtii ACO62742 Micromonas sp. RCC299 ACO64669 Micromonas sp. RCC299 NP_001043785 Oryza sativa Japonica Group NP_001044230 Oryza sativa Japonica Group NP_001048226 Oryza sativa Japonica Group NP_001051776 Oryza sativa Japonica Group NP_001051777 Oryza sativa Japonica Group e_gw1.20.00.34.1 Ostreococcus tauri gw1.04.00.273.1 Ostreococcus tauri e_gw1.180.117.1 Physcomitrella patens subsp. patens e_gw1.22.71.1 Physcomitrella patens subsp. patens e_gw1.41.196.1 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_830086 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_4290009 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_50204 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_53000005 Physcomitrella patens subsp. patens fgenesh2_pg.scaffold_115000063 Physcomitrella patens subsp. patens gw1.23.41.1 Physcomitrella patens subsp. patens 29915.m000486 Ricinus communis 29983.m003185 Ricinus communis 30076.m004513 Ricinus communis 30170.m014073 Ricinus communis XP_002948645 Volvox carteri f. nagariensis XP_002954335 Volvox carteri f. nagariensis XP_002959243 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31451 4.6E-240 1 406 No hit NA SUPERFAMILY SSF51445 3.7E-80 28 376 IPR017853 Glycoside hydrolase, superfamily Pfam PF00150 1.6E-12 40 326 IPR001547 Glycoside hydrolase, family 5
Subcellular Localization
Localization	extracellular
Evidence	SUBAcon
Pubmed ID	23180787