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| Locus name | AT2G36790 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Lipid/Carbohydrate metabolism |
| Effect for Senescence | unclear |
| Gene Description | UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Gene Ontology | |
| Sequence | AT2G36790.1 | Genomic | mRNA | CDS | Protein
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| Mutant name |
UGT73C6oe |
| Mutant/Transgenic |
transgenic |
| Ecotype |
Col-0 |
| Mutagenesis type |
tansgene |
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
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| Details | | target: AT2G36790.1
miRNA: ath-miR396a
miRNA: ath-miR396a
mfe: -25.1 kcal/mol
p-value: 0.020028
position: 1433
target 5' U C C G 3'
CAG UC A AAGGCUGUGGAA
GUC AG U UUUCGACACCUU
miRNA 3' A U C 5'
target: AT2G36790.1
miRNA: ath-miR396a
miRNA: ath-miR396a
mfe: -25.7 kcal/mol
p-value: 0.014044
position: 1350
target 5' G G A G 3'
AG U AAGAAGGC GUGGAA
UC A UUCUUUCG CACCUU
miRNA 3' G A G A 5'
target: AT2G36790.1
miRNA: ath-miR396b
miRNA: ath-miR396b
mfe: -23.3 kcal/mol
p-value: 0.054101
position: 1434
target 5' C C C G 3'
AG UC A AAGGCUGUGGAA
UC AG U UUUCGACACCUU
miRNA 3' U A U C 5'
target: AT2G36790.1
miRNA: ath-miR396b
miRNA: ath-miR396b
mfe: -26.3 kcal/mol
p-value: 0.011223
position: 1349
target 5' G G A G 3'
GAG U AAGAAGGC GUGGAA
UUC A UUCUUUCG CACCUU
miRNA 3' A G A 5'
target: AT2G36790.1
miRNA: ath-miR838
miRNA: ath-miR838
mfe: -22.1 kcal/mol
p-value: 0.057269
position: 803
target 5' U C A U C 3'
UGUGCAA A GGUAGGAG AGA
ACACGUU U UCAUCUUC UUU
miRNA 3' C U 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_141662 | |
| Cross Link | |
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