Basic information
Locus name	AT3G21790
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Lipid/Carbohydrate metabolism
Effect for Senescence	unclear
Gene Description	UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process metabolic process molecular function transferase activity, transferring hexosyl groups
Sequence	AT3G21790.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
miRNA Interaction
Details	target: AT3G21790.1  miRNA: ath-miR778 miRNA: ath-miR778 mfe: -30.8 kcal/mol  p-value: 0.000411  position:  604  target 5' C      U            G G 3'             CGGUGU UGUAAACCAAGC A              GCCACA GUAUUUGGUUCG U   miRNA  3'        U            G   5'  target: AT3G21790.1  miRNA: ath-miR839 miRNA: ath-miR839 mfe: -27.2 kcal/mol  p-value: 0.003873  position:  846  target 5' U               C  C    A 3'             GGGAGC AUGGGAGG UU GGUG              CCCUUG UACUUUCC AA CCAU   miRNA  3'        C                  5'  target: AT3G21790.1  miRNA: ath-miR867 miRNA: ath-miR867 mfe: -22.6 kcal/mol  p-value: 0.022182  position:  725  target 5' A     U        U   G  U 3'             UCCUG UGGACCAU GUU CA              AGGAU AUUUGGUA CAA GU   miRNA  3' A     U               U 5'
Ortholog Group
Ortholog Groups: OG5_135255	Accession Taxon NP_172204 Arabidopsis thaliana NP_172206 Arabidopsis thaliana NP_180535 Arabidopsis thaliana NP_180536 Arabidopsis thaliana NP_188812 Arabidopsis thaliana NP_188813 Arabidopsis thaliana NP_188815 Arabidopsis thaliana NP_188816 ( AT3G21790 ) Arabidopsis thaliana NP_188817 Arabidopsis thaliana NP_193261 Arabidopsis thaliana NP_193263 Arabidopsis thaliana NP_563784 Arabidopsis thaliana NP_001059725 Oryza sativa Japonica Group NP_001059726 Oryza sativa Japonica Group NP_001059728 Oryza sativa Japonica Group NP_001059731 Oryza sativa Japonica Group NP_001059754 Oryza sativa Japonica Group NP_001059755 Oryza sativa Japonica Group NP_001060001 Oryza sativa Japonica Group e_gw1.93.46.1 Physcomitrella patens subsp. patens 29681.m001330 Ricinus communis 29681.m001331 Ricinus communis 29724.m000844 Ricinus communis 29724.m000846 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF53756 2.1E-109 4 479 No hit NA PANTHER PTHR11926 8.9E-148 5 485 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase Pfam PF00201 2.0E-22 258 403 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase ProSitePatterns PS00375 NA 350 393 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase