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About
Basic information
Locus name
AT3G60640
Alias
ATG8G
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Nutrient recycling:Autophagy
Effect for Senescence
delay
Gene Description
Autophagy gene 8g
Evidence
Molecuar and physiologic evidence:GUS staining [Ref 1]
References
1: Slavikova S, Shy G, Yao Y, Glozman R, Levanony H, Pietrokovski S, Elazar Z, Galili G
The autophagy-associated Atg8 gene family operates both under favourable growth conditions and under starvation stresses in Arabidopsis plants.
J. Exp. Bot. 2005 Nov;56(421):2839-49
Sequence
AT3G60640.1 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_126969
Accession
Taxon
NP_001078424
Arabidopsis thaliana
NP_001154497
Arabidopsis thaliana
NP_176395
Arabidopsis thaliana
NP_178631
Arabidopsis thaliana
NP_182042
Arabidopsis thaliana
NP_191623
( AT3G60640 )
Arabidopsis thaliana
NP_192371
Arabidopsis thaliana
NP_567504
Arabidopsis thaliana
NP_567642
Arabidopsis thaliana
NP_849298
Arabidopsis thaliana
NP_849395
Arabidopsis thaliana
NP_850431
Arabidopsis thaliana
59275
Chlamydomonas reinhardtii
ACO68142
Micromonas sp. RCC299
NP_001053929
Oryza sativa Japonica Group
NP_001059767
Oryza sativa Japonica Group
NP_001061171
Oryza sativa Japonica Group
estExt_genewise1.C_Chr_01.00010658
Ostreococcus tauri
estExt_Genewise1.C_2490044
Physcomitrella patens subsp. patens
estExt_Genewise1.C_260093
Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_2090070
Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2090080
Physcomitrella patens subsp. patens
gw1.209.48.1
Physcomitrella patens subsp. patens
29636.m000773
Ricinus communis
29842.m003584
Ricinus communis
30064.m000481
Ricinus communis
30064.m000482
Ricinus communis
30174.m008829
Ricinus communis
e_gw1.2.784.1
Thalassiosira pseudonana CCMP1335
XP_002952089
Volvox carteri f. nagariensis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR10969
3.6E-75
1
117
IPR004241
Autophagy protein Atg8 ubiquitin-like
SUPERFAMILY
SSF54236
1.4E-42
4
117
No hit
NA
Pfam
PF02991
1.6E-49
14
117
IPR004241
Autophagy protein Atg8 ubiquitin-like
Subcellular Localization
Localization
cytosol
Evidence
SUBAcon
Pubmed ID
23180787