Basic information
Locus name	AT4G24120
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Nutrient recycling
Effect for Senescence	unclear
Gene Description	transporter, putative similar to iron-phytosiderophore transporter protein yellow stripe 1 [Zea mays] GI:10770865; contains Pfam profile PF03169: OPT oligopeptide transporter protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process transmembrane transport
Sequence	AT4G24120.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_129625	Accession Taxon NP_176750 Arabidopsis thaliana NP_197826 Arabidopsis thaliana NP_198916 Arabidopsis thaliana NP_200167 Arabidopsis thaliana NP_564525 Arabidopsis thaliana NP_566584 Arabidopsis thaliana NP_566806 Arabidopsis thaliana NP_567694 ( AT4G24120 ) Arabidopsis thaliana ACO62052 Micromonas sp. RCC299 NP_001042539 Oryza sativa Japonica Group NP_001044692 Oryza sativa Japonica Group NP_001045677 Oryza sativa Japonica Group NP_001045678 Oryza sativa Japonica Group NP_001047586 Oryza sativa Japonica Group NP_001052640 Oryza sativa Japonica Group NP_001052641 Oryza sativa Japonica Group NP_001053350 Oryza sativa Japonica Group NP_001053351 Oryza sativa Japonica Group NP_001053353 Oryza sativa Japonica Group NP_001053449 Oryza sativa Japonica Group NP_001053450 Oryza sativa Japonica Group NP_001054241 Oryza sativa Japonica Group NP_001061442 Oryza sativa Japonica Group e_gw1.2.87.1 Physcomitrella patens subsp. patens e_gw1.38.51.1 Physcomitrella patens subsp. patens 29636.m000748 Ricinus communis 29786.m000095 Ricinus communis 30008.m000825 Ricinus communis 30068.m002569 Ricinus communis 30098.m001736 Ricinus communis 30131.m007040 Ricinus communis 30170.m013736 Ricinus communis 30199.m000881 Ricinus communis 38556.m000013 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31645 2.7E-304 13 673 No hit NA TIGRFAM TIGR00728 2.8E-164 32 657 IPR004813 Oligopeptide transporter, OPT superfamily Pfam PF03169 1.9E-126 46 657 IPR004813 Oligopeptide transporter, OPT superfamily
Subcellular Localization
Localization	plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787