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| Locus name | AT5G49990 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Nutrient recycling |
| Effect for Senescence | unclear |
| Gene Description | xanthine/uracil permease family protein similar to permease 1 [Zea mays] GI:7844006; contains Pfam profile: PF00860 Xanthine/uracil permeases family |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Gene Ontology | |
| Sequence | AT5G49990.1 | Genomic | mRNA | CDS | Protein
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
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| Details | | target: AT5G49990.1
miRNA: ath-miR2934
miRNA: ath-miR2934
mfe: -33.3 kcal/mol
p-value: 0.000535
position: 1523
target 5' G C U 3'
UCCAAGGC UUUGUGGGAGGA
AGGUUCCG AAACGUCUUUCU
miRNA 3' C 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_126747 | |
| Cross Link | |
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| Localization | plasma membrane |
| Evidence | SUBAcon |
| Pubmed ID | 23180787 |
