Basic information
Locus name	AT1G79520
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Nutrient recycling
Effect for Senescence	unclear
Gene Description	cation efflux family protein contains cation efflux family protein domain, Pfam:PF01545
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process cation transport transmembrane transport cellular component integral to membrane molecular function cation transmembrane transporter activity
Sequence	AT1G79520.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
miRNA Interaction
Details	target: AT1G79520.1  miRNA: ath-miR773 miRNA: ath-miR773 mfe: -25.1 kcal/mol  p-value: 0.024550  position:  1213  target 5' C                   C 3'             AGG AGAAGCUGG AGCAA              UCU UUUUCGACC UCGUU   miRNA  3' C   G         U     U 5'
Ortholog Group
Ortholog Groups: OG5_128683	Accession Taxon NP_173081 Arabidopsis thaliana NP_178070 ( AT1G79520 ) Arabidopsis thaliana NP_181477 Arabidopsis thaliana NP_191365 Arabidopsis thaliana CMC075C Cyanidioschyzon merolae strain 10D 150292 Chlamydomonas reinhardtii 195957 Chlamydomonas reinhardtii ACO68975 Micromonas sp. RCC299 NP_001041920 Oryza sativa Japonica Group NP_001044741 Oryza sativa Japonica Group NP_001049439 Oryza sativa Japonica Group gw1.03.00.266.1 Ostreococcus tauri e_gw1.11.107.1 Physcomitrella patens subsp. patens estExt_fgenesh2_pg.C_1060042 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_870033 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_119000002 Physcomitrella patens subsp. patens 28067.m000106 Ricinus communis 29773.m000281 Ricinus communis 29955.m001164 Ricinus communis 30186.m001306 Ricinus communis e_gw1.2.384.1 Thalassiosira pseudonana CCMP1335 XP_002954166 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11562 2.1E-111 29 399 IPR002524 Cation efflux protein SUPERFAMILY SSF161111 5.5E-41 111 310 No hit NA TIGRFAM TIGR01297 3.8E-33 116 389 IPR002524 Cation efflux protein Pfam PF01545 2.9E-43 118 392 IPR002524 Cation efflux protein SUPERFAMILY SSF160240 2.9E-16 312 389 No hit NA
Subcellular Localization
Localization	peroxisome
Evidence	SUBAcon
Pubmed ID	23180787