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Locus name | AT3G47420 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Nutrient recycling |
Effect for Senescence | unclear |
Gene Description | glycerol-3-phosphate transporter, putative / glycerol 3-phosphate permease, putative similar to cAMP inducible 2 protein [Mus musculus] GI:4580997, glycerol-3-phosphate transporter (glycerol 3-phosphate permease) [Homo sapiens] GI:7543982; contains Pfam profile PF00083: major facilitator superfamily protein |
Evidence | Genomic evidence:microarray data [Ref 1] |
References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
Gene Ontology | |
Sequence | AT3G47420.1 | Genomic | mRNA | CDS | Protein
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Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4) |
Comparation |
Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction | |
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Details | | target: AT3G47420.1 miRNA: ath-miR828 miRNA: ath-miR828 mfe: -22.8 kcal/mol p-value: 0.014068
position: 799 target 5' U G A 3' UGGAA ACU GUUUAA CAAGA ACCUU UGA UAAAUU GUUCU miRNA 3' A G C 5'
target: AT3G47420.1 miRNA: ath-miR867 miRNA: ath-miR867 mfe: -22.3 kcal/mol p-value: 0.038341
position: 1777 target 5' C C G 3' UCC GGUGGACUAUGU CAA AGG UUAUUUGGUACA GUU miRNA 3' A A A 5'
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Ortholog Group | |
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Ortholog Groups: OG5_127818 | |
Cross Link | |
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