Basic information   
Locus name AT1G75170
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryNutrient recycling
Effect for Senescenceunclear
Gene DescriptionSEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to polyphosphoinositide binding protein Ssh1p (GI:2739044) {Glycine max}; similar to SEC14 cytosolic factor (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PCTP) (SP:P24859) [Kluyveromyces lactis] and to SEC14 cytosolic factor (SP:P53989) [Candida glabrata]
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

SequenceAT1G75170.1 | Genomic | mRNA | CDS | Protein
AT1G75170.2 | Genomic | mRNA | CDS | Protein
AT1G75170.3 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_128727
AccessionTaxon
NP_001031283 ( AT1G75170 ) Arabidopsis thaliana
NP_001031598Arabidopsis thaliana
NP_001078501Arabidopsis thaliana
NP_177653Arabidopsis thaliana
NP_192609Arabidopsis thaliana
NP_195382Arabidopsis thaliana
CMH189CCyanidioschyzon merolae strain 10D
CMT608CCyanidioschyzon merolae strain 10D
183333Chlamydomonas reinhardtii
193602Chlamydomonas reinhardtii
ACO63096Micromonas sp. RCC299
ACO66478Micromonas sp. RCC299
NP_001042665Oryza sativa Japonica Group
NP_001051120Oryza sativa Japonica Group
0100010148Ostreococcus tauri
estExt_Genewise1.C_540066Physcomitrella patens subsp. patens
estExt_fgenesh1_kg.C_1770003Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2230040Physcomitrella patens subsp. patens
gw1.351.46.1Physcomitrella patens subsp. patens
29634.m002152Ricinus communis
29818.m000412Ricinus communis
30170.m014221Ricinus communis
estExt_thaps1_ua_kg.C_chr_230013Thalassiosira pseudonana CCMP1335
XP_002950943Volvox carteri f. nagariensis
XP_002953090Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR101741.4E-1278261No hitNA
SUPERFAMILYSSF469382.5E-171584IPR011074CRAL/TRIO, N-terminal domain
PfamPF037658.3E-102268IPR011074CRAL/TRIO, N-terminal domain
SMARTSM011001.2E-74368IPR011074CRAL/TRIO, N-terminal domain
ProSiteProfilesPS5019119.082246IPR001251CRAL-TRIO domain
SUPERFAMILYSSF520871.7E-4782261IPR001251CRAL-TRIO domain
SMARTSM005165.5E-5188243IPR001251CRAL-TRIO domain
PfamPF006501.7E-3889241IPR001251CRAL-TRIO domain