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| Locus name | AT2G04100 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Nutrient recycling |
| Effect for Senescence | unclear |
| Gene Description | MATE efflux family protein similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] GI:12231296; contains Pfam profile PF01554: Uncharacterized membrane protein family |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Gene Ontology | |
| Pathway | |
| Sequence | AT2G04100.1 | Genomic | mRNA | CDS | Protein
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
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| Details | | target: AT2G04100.1
miRNA: ath-miR857
miRNA: ath-miR857
mfe: -24.2 kcal/mol
p-value: 0.013805
position: 1159
target 5' C A A A 3'
UACGCCUUUAGCA U GCAAAG
AUGUGGAAGUUGU A UGUUUU
miRNA 3' U 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_141272 | |
| Cross Link | |
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