Basic information   
Locus name AT5G27520
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryNutrient recycling
Effect for Senescenceunclear
Gene Descriptionmitochondrial substrate carrier family protein
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

SequenceAT5G27520.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_132652
AccessionTaxon
NP_198104 ( AT5G27520 ) Arabidopsis thaliana
NP_566251Arabidopsis thaliana
ACO68013Micromonas sp. RCC299
NP_001055452Oryza sativa Japonica Group
estExt_fgenesh1_pg.C_Chr_01.00010164Ostreococcus tauri
estExt_Genewise1.C_220182Physcomitrella patens subsp. patens
estExt_Genewise1.C_750029Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_900008Physcomitrella patens subsp. patens
estExt_fgenesh2_pg.C_860020Physcomitrella patens subsp. patens
29844.m003350Ricinus communis
30128.m008767Ricinus communis
e_gw1.24.28.1Thalassiosira pseudonana CCMP1335
XP_002958714Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR240899.0E-2034316No hitNA
ProSiteProfilesPS5092015.4796IPR018108Mitochondrial substrate/solute carrier
PfamPF001537.0E-131097IPR018108Mitochondrial substrate/solute carrier
SUPERFAMILYSSF1035063.3E-5011296IPR023395Mitochondrial carrier domain
ProSiteProfilesPS509209.8106186IPR018108Mitochondrial substrate/solute carrier
PfamPF001533.9E-8107189IPR018108Mitochondrial substrate/solute carrier
ProSiteProfilesPS5092015.5204300IPR018108Mitochondrial substrate/solute carrier
PfamPF001534.1E-15205298IPR018108Mitochondrial substrate/solute carrier
Subcellular Localization   
Localizationperoxisome
EvidenceSUBAcon
Pubmed ID23180787