Basic information   
Locus name AT5G46050
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryNutrient recycling
Effect for Senescenceunclear
Gene Descriptionproton-dependent oligopeptide transport (POT) family protein contains Pfam profile: PF00854 POT family
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
biological process
cellular component
molecular function
Pathway
Reactome
SequenceAT5G46050.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_143104
AccessionTaxon
NP_181578Arabidopsis thaliana
NP_199416Arabidopsis thaliana
NP_199417 ( AT5G46050 ) Arabidopsis thaliana
NP_001048910Oryza sativa Japonica Group
NP_001064821Oryza sativa Japonica Group
NP_001064823Oryza sativa Japonica Group
estExt_Genewise1.C_3890007Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_302000005Physcomitrella patens subsp. patens
29637.m000761Ricinus communis
29637.m000762Ricinus communis
29637.m000763Ricinus communis
29729.m002332Ricinus communis
29981.m000575Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR116540.04582IPR000109Proton-dependent oligopeptide transporter family
SUPERFAMILYSSF1034733.4E-2020247IPR016196Major facilitator superfamily domain, general substrate transporter
PfamPF008541.4E-84100500IPR000109Proton-dependent oligopeptide transporter family
SUPERFAMILYSSF1034733.4E-20326559IPR016196Major facilitator superfamily domain, general substrate transporter
Subcellular Localization   
Localizationvacuole
EvidenceSUBAcon
Pubmed ID23180787