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About
Basic information
GenBank ID
U68221
Alias
LSC790
Organism
Rapeseed (
Brassica napus
)
Taxonomic identifier
[NCBI]
Function category
Protein degradation/modification
Effect for Senescence
unclear
Gene Description
Cysteine protease;upregulated in senescing leaves
Evidence
Molecular evidence:SSH [Ref 1]
References
1: Buchanan-Wollaston V, Ainsworth C
Leaf senescence in Brassica napus: cloning of senescence related genes by subtractive hybridisation.
Plant Mol. Biol. 1997 Mar;33(5):821-34
Gene Ontology
biological process
proteolysis
molecular function
cysteine-type peptidase activity
Sequence
U68221.1 |
mRNA
|
CDS
|
Protein
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR12411
4.6E-52
1
85
IPR013128
Peptidase C1A, papain
Pfam
PF00112
1.1E-23
1
84
IPR000668
Peptidase C1A, papain C-terminal
SUPERFAMILY
SSF54001
6.3E-28
1
83
No hit
NA
ProSitePatterns
PS00639
NA
29
39
IPR025660
Cysteine peptidase, histidine active site
ProSitePatterns
PS00640
NA
53
72
IPR025661
Cysteine peptidase, asparagine active site